|
Time
|
Session
|
Speaker
|
|
Monday October 22
|
|
11:30 - 12:30
|
Registration and Lunch (provided)
|
|
12:30 - 12:45
|
Introduction and Greetings
|
Neil Winegarden (OCI Genomics Centre)
|
|
12:45-13:00
|
FGED Overview
|
John Quackenbush (Dana Farber)
|
|
Presentations by Large Organisations and Initiatives
|
|
13:00 - 13:20
|
The OICR and the International Cancer Genome Consortium Project
|
Francis Ouellette (OICR)
|
|
13:25 - 13:45
|
The DOE Knowledge Base
|
Folker Meyer (Argonne National Laboratory; US Dept of Energy)
|
|
13:50 - 14:10
|
The Centre for Applied Genomics
|
Richard Wintle (SickKids Hospital)
|
|
14:15 - 14:35
|
SEQ-Answers
|
Joann Delenick (Intralogics/Patent Vision)
|
|
14:40 - 15:00
|
Break
|
|
Challenges for Smaller Groupss
|
|
15:05 - 15:25
|
The Donnely Centre
|
Corey Nislow (University of Toronto)
|
|
15:30 - 15:50
|
The OCI Genomics Centre
|
Carl Virtanen (OCIGC)
|
|
15:55 - 16:15
|
London Regional Genomics Centre
|
John Robinson and David Carter (LRGC)
|
|
16:20-16:40
|
Open Slot
|
TBD
|
|
16:45 - 17:00
|
Wrap up and departure for Day 1
|
|
Tuesday October 23
|
|
7:30 - 10:25
|
FGED Board Meeting
|
Open to all registrants
|
|
10:30 - 10:45
|
Break
|
|
Application Specific Issues
|
|
10:45 - 11:05
|
Storing and Analyzing Patient Genomes and Phenotypes at the FORGE National Data Centre
|
Mike Brudno (University of Toronto/Sick Kids)
|
|
11:10 - 11:30
|
RNA-Seq
|
Alvis Brazma (European Bioinformatics Institute)
|
|
11:35 - 11:55
|
ChIP-Seq
|
Mathieu Lupien (Ontario Cancer Institute)
|
|
12:00 - 12:30
|
Lunch
|
|
Software Tools
|
|
12:30 - 12:50
|
Software/Databases for Pathway and Network Analysis
|
Gary Bader (University of Toronto)
|
|
12:55 - 13:15
|
Integrative Genomics Tools
|
Michael Reich (Broad Institute)
|
|
13:20 - 13:40
|
Regulome Explorer
|
Michael Miller (Institute for Systems Biology)
|
|
13:45 - 14:05
|
Database of Genomic Variants
|
Jeff MacDonald (SickKids)
|
|
14:10 - 14:25
|
Break
|
|
Applied Genomics
|
|
14:30 - 14:50
|
Clinical Genomics
|
John Quackenbush (Dana Farber)
|
|
14:55 - 15:15
|
Infectious Disease
|
Chris Stoeckert (Penn Center for Bioinformatics)
|
|
15:20 - 15:40
|
Summary
|
Neil Winegarden (OCI Genomics Centre)
|
|
15:45 - 16:45
|
Mediated Discussion on Data Standards and Data Sharing
|
|
16:45
|
Thank-yous and Departures
|
